Identification of phenotypic and genotypic properties and cold adaptive mechanisms of novel freeze-thaw stress-resistant strain Pseudomonas mandelii from Antarctica

dc.authorid0000-0003-0270-6229
dc.authorid0000-0002-7219-8015
dc.authorid0000-0002-6287-2774
dc.authorid0000-0002-4873-9547
dc.authorid0000-0001-6493-7714
dc.authorid0000-0003-3100-0866
dc.contributor.authorMumcu, Hande
dc.contributor.authorCebeci, Emine Tugce Sarac
dc.contributor.authorKilic, Meryem Menekse
dc.contributor.authorCebeci, Anil
dc.contributor.authorGunes, Yagmur
dc.contributor.authorKaracan, Ilker
dc.contributor.authorOztug, Merve
dc.date.accessioned2025-05-10T19:54:22Z
dc.date.issued2023
dc.departmentİstanbul Medeniyet Üniversitesi
dc.description.abstractAntarctica is a region with harsh conditions which have become a focus of research for identifying novel extreme microorganisms in recent years. Here, we identified and characterized the KGI_MA19 isolate obtained by enriched culture and freeze-thaw stress treatment from the sediment samples of King George Island in Antarctica. Whole-genome sequencing, MLSA, and phylogenetic analyses revealed that this isolate was a novel strain of Pseudomonas mandelii sharing less similarity to the first Pseudomonas mandelii isolate 6A1 from Antarctica. The phenotypic and biochemical characterizations indicate that this psychrotolerant and halotolerant strain can use disaccharides as a carbon source, has denitrification ability, and has multiple antibiotic resistance. Moreover, comparative proteomic analyses showed that P. mandelii KGI_MA19 adapts to the cold environment by changing its membrane composition, excreting EPS, and producing major cold shock proteins, in addition to turning off its other stress response mechanisms.
dc.description.sponsorshipMinistry of Industry and Technology; Istanbul Technical University (ITU) Polar Research Center (PolReC)
dc.description.sponsorshipThis study was carried under the auspices of Presidency of The Republic of Turkey, supported by the Ministry of Industry and Technology, and coordinated by Istanbul Technical University (ITU) Polar Research Center (PolReC). This study was in the frame of bilateral agreement with Polish Institute of Biochemistry and Biophysics (IBB) and PolReC. We would like to thank to 42nd expedition crew for their hospitality and help in Henryk Arctowski Polish Antarctic Station.
dc.identifier.doi10.1007/s00300-023-03114-y
dc.identifier.endpage183
dc.identifier.issn0722-4060
dc.identifier.issn1432-2056
dc.identifier.issue3
dc.identifier.scopus2-s2.0-85147694602
dc.identifier.scopusqualityQ2
dc.identifier.startpage169
dc.identifier.urihttps://doi.org/10.1007/s00300-023-03114-y
dc.identifier.urihttps://hdl.handle.net/20.500.14730/13029
dc.identifier.volume46
dc.identifier.wosWOS:000931749300001
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofPolar Biology
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WOS_20250302
dc.subjectAntarctic
dc.subjectPseudomonas mandelii
dc.subjectPolyextremophilic
dc.subjectGenome
dc.subjectProteome
dc.titleIdentification of phenotypic and genotypic properties and cold adaptive mechanisms of novel freeze-thaw stress-resistant strain Pseudomonas mandelii from Antarctica
dc.typeArticle

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