Identification of D- and L-phenylalanine enantiomeric mixtures by employing deep neural network models

dc.authorid0000-0002-8624-6700
dc.authorid0000-0002-7351-4980
dc.authorid0000-0002-8929-0459
dc.authorid0000-0002-5622-6960
dc.contributor.authorNigdelioglu, Ebru
dc.contributor.authorToprak, Elif
dc.contributor.authorAkkurt, Melike Guney
dc.contributor.authorBarkana, Duygun Erol
dc.contributor.authorKazancı, Murat
dc.contributor.authorUyaver, Sahin
dc.contributor.authorCalik, Nurullah
dc.date.accessioned2025-05-10T19:43:01Z
dc.date.issued2024
dc.departmentİstanbul Medeniyet Üniversitesi
dc.description.abstractPhenylalanine is an aromatic essential amino acid that exhibits the tendency to self -aggregate into fibrillar structures in its enantiomerically pure form. This observation was indicated as the underlying mechanism of phenylketonuria, which is a genetic condition associated with various neurological, physical, and developmental issues, characterized with phenylalanine buildup in the brain. The presence of D-phenylalanine was demonstrated previously to inhibit the formation of fibrils by L-phenlyalanine, indicating its potential use in phenylketonuria treatment. In this study, several combinations of D and L-phenylalanine were examined with the help of stateof-the-art deep learning methods for their fibril forming capacity, demonstrating the usefulness and accuracy of deep learning methods in distinguishing between different self -assembled structures.
dc.description.sponsorshipTurkish - German University Scientific Research Projects Commission [2019BF0005]
dc.description.sponsorshipAcknowledgements This study was supported by Turkish - German University Scientific Research Projects Commission under the grant no: 2019BF0005. We thank BIcenter dotLTAM - Istanbul Medeniyet University for letting per-form experimental work in its facilities.
dc.identifier.doi10.1016/j.molstruc.2024.137628
dc.identifier.issn0022-2860
dc.identifier.issn1872-8014
dc.identifier.scopus2-s2.0-85183943557
dc.identifier.scopusqualityQ1
dc.identifier.urihttps://doi.org/10.1016/j.molstruc.2024.137628
dc.identifier.urihttps://hdl.handle.net/20.500.14730/10477
dc.identifier.volume1304
dc.identifier.wosWOS:001178053500001
dc.identifier.wosqualityQ2
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.language.isoen
dc.publisherElsevier
dc.relation.ispartofJournal of Molecular Structure
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WOS_20250302
dc.subjectPhenylalanine
dc.subjectSelf-assembly
dc.subjectEnantiomer
dc.subjectDeep learning
dc.subjectPre -trained models
dc.titleIdentification of D- and L-phenylalanine enantiomeric mixtures by employing deep neural network models
dc.typeArticle

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